Information for 11-CACTGMYTAASWG (Motif 14)

A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G
Reverse Opposite:
A G T C C G T A A T G C A C G T A C G T C G T A C T G A C A G T A G T C C G T A A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.6 +/- 25.6bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CACTGMYTAASWG--
------TTAAGTGGN
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CACTGMYTAASWG-
------TTAAGTGC
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACTGMYTAASWG------
--NTNNTTAAGTGGNTNAN
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CACTGMYTAASWG--
------TTAAGTGGT
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CACTGMYTAASWG------
--NTNNTTAAGTGGTTANN
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CACTGMYTAASWG-
------CTAATKGV
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACTGMYTAASWG--
-----GCTAATTGCT
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

Hmx2/MA0897.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CACTGMYTAASWG-----
-ATTCNTTAATTGCTTGT
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CACTGMYTAASWG-----
-ATTCNTTAATTGCTTGT
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

Nkx2-5/MA0063.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CACTGMYTAASWG
------TTAATTG
 A G T C C G T A A G T C A C G T A C T G G T C A A G C T A C G T C G T A C G T A A T C G C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G