Information for 20-TTTAGCATGCTGA (Motif 32)

A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A
Reverse Opposite:
A C G T A T G C C G T A A C T G A T G C C G T A A C G T A C T G A G T C A C G T T G C A C G T A C T G A
p-value:1e-5
log p-value:-1.375e+01
Information Content per bp:1.893
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.3 +/- 19.8bp
Average Position of motif in Background53.8 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTTAGCATGCTGA--
-----CCTGCTGAGH
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTAGCATGCTGA
BTVATTWGCATA----
 A C G T A C G T A C G T A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTAGCATGCTGA-
---AATTTGCTGAC
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTTAGCATGCTGA--
---AAAATGCTGACT
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TTTAGCATGCTGA----
-------TGCTGACTCA
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTAGCATGCTGA----
--NNTCCTGCTGTGNNN
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTTAGCATGCTGA---
-TAAAAATGCTGACTT
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTTAGCATGCTGA-----
---AAANTGCTGACTNAG
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTAGCATGCTGA----
--TCNCCTGCTGNGNNN
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTTAGCATGCTGA----
--TNTCCTGCTGTGNNG
 A G C T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G A G T C A C G T T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G