Information for 15-CTAGGCAGGCTGCCTG (Motif 28)

T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
Reverse Opposite:
G T A C T G C A C A T G A C T G T G A C C G T A A T C G A T G C A G T C C A G T A C T G T A G C G T A C G A C T C T G A A C T G
p-value:1e-8
log p-value:-1.879e+01
Information Content per bp:1.676
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif52.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets57.0 +/- 28.2bp
Average Position of motif in Background60.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTAGGCAGGCTGCCTG
--TGGCAGNCTGCCAG
 T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTAGGCAGGCTGCCTG
CTTGGCANNNTGCCAA
 T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTAGGCAGGCTGCCTG-
---GTCACGCTCNCTGA
 T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G A C G T
A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTAGGCAGGCTGCCTG
WDNCTGGGCA---------
 A C G T A C G T A C G T T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTAGGCAGGCTGCCTG
-TTGGCATGGTGCCA-
 T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTAGGCAGGCTGCCTG
CTTGGCAA--------
 T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGCAGGCTGCCTG
TNNGGGCAG--------
 A C G T T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTAGGCAGGCTGCCTG
---GGCGCGCT-----
 T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTAGGCAGGCTGCCTG
-AAGGCAAGTGT----
 T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTAGGCAGGCTGCCTG
TCCCAGMCRAGCCCC---
 A C G T A C G T T A G C G A C T C T G A A C T G A T C G A G T C G T C A C T A G T A C G A T G C A C G T A C T G G T A C G T A C A C G T C A T G
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T A C G T A C G T