Information for 14-CGGAGCCTCCATTTTC (Motif 25)

A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
Reverse Opposite:
A C T G C G T A G T C A C G T A G T C A A C G T A C T G C T A G C G T A A C T G A C T G A G T C A C G T A G T C A G T C A T C G
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 29.6bp
Average Position of motif in Background52.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGAGCCTCCATTTTC
CGGAGC----------
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGGAGCCTCCATTTTC
----GCCGCCATCTTG
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGGAGCCTCCATTTTC
----GCNGCCATCTTG
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CGGAGCCTCCATTTTC
---GTCCGCCATTA--
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGGAGCCTCCATTTTC
----ACTTTCACTTTC
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CGGAGCCTCCATTTTC
----RSTTTCRSTTTC
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CGGAGCCTCCATTTTC
----GKMTCADRTTWC
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CGGAGCCTCCATTTTC----
---TGTTCCCATTGTGTACT
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CGGAGCCTCCATTTTC
--------CCWTTGTY
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CGGAGCCTCCATTTTC
----ASTTTCASTTYC
 A T G C A C T G A C T G C G T A C T A G A G T C A G T C A C G T A G T C A G T C G T C A A C G T A C G T A C G T C G A T A G T C
A C G T A C G T A C G T A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C