Information for 10-AAGCTCCCAAGGA (Motif 20)

G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C G T A C A G C T C G A T T A C G C A T G C T A G C G T A T A C G G T A C C G A T C A G T
p-value:1e-10
log p-value:-2.315e+01
Information Content per bp:1.781
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.2 +/- 24.6bp
Average Position of motif in Background45.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGCTCCCAAGGA--
-NGCTTTCTAGGAAN
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A A C G T A C G T
A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGCTCCCAAGGA
--GCTCCG-----
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGCTCCCAAGGA-
--GTCCCCAGGGGA
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGCTCCCAAGGA-
--NGTCCCNNGGGA
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A A C G T
A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGCTCCCAAGGA
AGCCACTCAAG--
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AAGCTCCCAAGGA--
-----NTCAAGGTCA
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

BCL6B/MA0731.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGCTCCCAAGGA-----
-TGCTTTCTAGGAATTCA
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AAGCTCCCAAGGA----
-------CAAGGHCANV
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAGCTCCCAAGGA
--ATTTCCAAGAA
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A
A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AAGCTCCCAAGGA--
-----BTCAAGGTCA
 G T C A C G T A A C T G A G T C C G A T G A T C G A T C A G T C C G T A C T G A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A