Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 525)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 49425)	% of Background Sequences with Motif
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-3	-8.806e+00	0.0545	54.0	10.29%	3014.9	6.10%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-3	-8.415e+00	0.0545	51.0	9.71%	2842.3	5.75%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-3	-8.185e+00	0.0545	80.0	15.24%	5091.2	10.31%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-3	-7.943e+00	0.0545	36.0	6.86%	1824.0	3.69%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-3	-7.903e+00	0.0545	32.0	6.10%	1554.2	3.15%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-3	-7.137e+00	0.0545	30.0	5.71%	1490.0	3.02%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-2	-4.866e+00	0.4008	39.0	7.43%	2429.6	4.92%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-1	-4.528e+00	0.4915	88.0	16.76%	6511.5	13.18%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e-1	-4.337e+00	0.5290	27.0	5.14%	1593.5	3.23%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e-1	-4.278e+00	0.5290	23.0	4.38%	1304.4	2.64%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-1	-3.529e+00	0.9704	108.0	20.57%	8548.6	17.30%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-1	-3.346e+00	1.0000	58.0	11.05%	4285.4	8.67%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-3.270e+00	1.0000	46.0	8.76%	3299.3	6.68%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-1	-3.265e+00	1.0000	60.0	11.43%	4476.2	9.06%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e-1	-3.170e+00	1.0000	36.0	6.86%	2498.2	5.06%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-1	-3.085e+00	1.0000	61.0	11.62%	4612.3	9.34%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-2.851e+00	1.0000	19.0	3.62%	1199.7	2.43%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-1	-2.807e+00	1.0000	7.0	1.33%	324.6	0.66%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-1	-2.735e+00	1.0000	50.0	9.52%	3774.3	7.64%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e-1	-2.731e+00	1.0000	4.0	0.76%	141.6	0.29%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-2.711e+00	1.0000	83.0	15.81%	6644.8	13.45%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-1	-2.645e+00	1.0000	15.0	2.86%	921.1	1.86%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-1	-2.645e+00	1.0000	37.0	7.05%	2700.6	5.47%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-1	-2.636e+00	1.0000	14.0	2.67%	846.8	1.71%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-1	-2.583e+00	1.0000	63.0	12.00%	4940.9	10.00%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-2.567e+00	1.0000	5.0	0.95%	211.5	0.43%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-2.560e+00	1.0000	101.0	19.24%	8299.9	16.80%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e-1	-2.518e+00	1.0000	4.0	0.76%	152.7	0.31%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-1	-2.387e+00	1.0000	9.0	1.71%	503.6	1.02%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-2.383e+00	1.0000	18.0	3.43%	1197.6	2.42%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-1	-2.381e+00	1.0000	8.0	1.52%	431.6	0.87%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-2.376e+00	1.0000	55.0	10.48%	4314.5	8.73%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e-1	-2.339e+00	1.0000	12.0	2.29%	734.4	1.49%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-2.256e+00	1.0000	3.0	0.57%	106.1	0.21%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-2.229e+00	1.0000	46.0	8.76%	3582.1	7.25%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-2.122e+00	1.0000	1.0	0.19%	12.7	0.03%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-2.102e+00	1.0000	15.0	2.86%	1006.4	2.04%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-2.068e+00	1.0000	67.0	12.76%	5480.6	11.09%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-2.025e+00	1.0000	25.0	4.76%	1846.9	3.74%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-2.024e+00	1.0000	38.0	7.24%	2955.8	5.98%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-2.001e+00	1.0000	13.0	2.48%	863.2	1.75%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.996e+00	1.0000	75.0	14.29%	6222.5	12.60%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.980e+00	1.0000	5.0	0.95%	255.8	0.52%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.973e+00	1.0000	30.0	5.71%	2283.9	4.62%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.867e+00	1.0000	60.0	11.43%	4941.9	10.00%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-1.861e+00	1.0000	25.0	4.76%	1887.8	3.82%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.856e+00	1.0000	18.0	3.43%	1299.8	2.63%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.850e+00	1.0000	28.0	5.33%	2146.7	4.35%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.836e+00	1.0000	39.0	7.43%	3102.7	6.28%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.819e+00	1.0000	25.0	4.76%	1898.6	3.84%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.819e+00	1.0000	18.0	3.43%	1307.3	2.65%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.801e+00	1.0000	50.0	9.52%	4081.5	8.26%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-1.787e+00	1.0000	2.0	0.38%	69.6	0.14%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.760e+00	1.0000	6.0	1.14%	350.7	0.71%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.751e+00	1.0000	34.0	6.48%	2694.7	5.45%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.744e+00	1.0000	3.0	0.57%	135.2	0.27%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.736e+00	1.0000	10.0	1.90%	666.9	1.35%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.719e+00	1.0000	13.0	2.48%	913.8	1.85%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.699e+00	1.0000	6.0	1.14%	357.9	0.72%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.686e+00	1.0000	3.0	0.57%	139.8	0.28%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.686e+00	1.0000	3.0	0.57%	139.4	0.28%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.680e+00	1.0000	2.0	0.38%	74.4	0.15%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.659e+00	1.0000	9.0	1.71%	598.5	1.21%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-1.631e+00	1.0000	15.0	2.86%	1097.3	2.22%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-1.572e+00	1.0000	23.0	4.38%	1794.4	3.63%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.564e+00	1.0000	2.0	0.38%	80.7	0.16%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-1.553e+00	1.0000	16.0	3.05%	1199.3	2.43%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.545e+00	1.0000	31.0	5.90%	2500.8	5.06%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-1.511e+00	1.0000	5.0	0.95%	302.5	0.61%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.491e+00	1.0000	18.0	3.43%	1385.5	2.80%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.488e+00	1.0000	68.0	12.95%	5833.2	11.81%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.471e+00	1.0000	15.0	2.86%	1133.5	2.29%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.449e+00	1.0000	4.0	0.76%	232.1	0.47%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.438e+00	1.0000	21.0	4.00%	1659.7	3.36%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.378e+00	1.0000	7.0	1.33%	480.2	0.97%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.368e+00	1.0000	6.0	1.14%	400.5	0.81%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.363e+00	1.0000	8.0	1.52%	565.2	1.14%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-1.352e+00	1.0000	8.0	1.52%	567.4	1.15%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-1.334e+00	1.0000	38.0	7.24%	3201.1	6.48%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.330e+00	1.0000	4.0	0.76%	245.4	0.50%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.307e+00	1.0000	14.0	2.67%	1088.0	2.20%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.299e+00	1.0000	42.0	8.00%	3576.5	7.24%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.286e+00	1.0000	20.0	3.81%	1617.4	3.27%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.275e+00	1.0000	2.0	0.38%	98.2	0.20%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-1.257e+00	1.0000	7.0	1.33%	500.5	1.01%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.253e+00	1.0000	5.0	0.95%	335.2	0.68%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.237e+00	1.0000	13.0	2.48%	1018.2	2.06%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-1.234e+00	1.0000	21.0	4.00%	1722.3	3.49%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.211e+00	1.0000	35.0	6.67%	2984.2	6.04%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.210e+00	1.0000	24.0	4.57%	1997.5	4.04%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-1.207e+00	1.0000	2.0	0.38%	103.7	0.21%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-1.207e+00	1.0000	2.0	0.38%	103.0	0.21%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.204e+00	1.0000	5.0	0.95%	342.0	0.69%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.168e+00	1.0000	32.0	6.10%	2732.8	5.53%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.163e+00	1.0000	17.0	3.24%	1390.5	2.81%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-1.156e+00	1.0000	9.0	1.71%	690.3	1.40%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.156e+00	1.0000	13.0	2.48%	1039.6	2.10%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.141e+00	1.0000	20.0	3.81%	1664.6	3.37%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.129e+00	1.0000	6.0	1.14%	438.2	0.89%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.126e+00	1.0000	15.0	2.86%	1224.9	2.48%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.126e+00	1.0000	7.0	1.33%	524.3	1.06%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.125e+00	1.0000	5.0	0.95%	355.0	0.72%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.112e+00	1.0000	6.0	1.14%	441.1	0.89%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-1.107e+00	1.0000	101.0	19.24%	9098.1	18.42%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-1.102e+00	1.0000	1.0	0.19%	38.4	0.08%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.100e+00	1.0000	46.0	8.76%	4037.7	8.17%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.098e+00	1.0000	8.0	1.52%	616.3	1.25%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.094e+00	1.0000	5.0	0.95%	359.1	0.73%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-1.069e+00	1.0000	14.0	2.67%	1152.4	2.33%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.067e+00	1.0000	6.0	1.14%	449.6	0.91%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.067e+00	1.0000	19.0	3.62%	1600.7	3.24%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-1.063e+00	1.0000	2.0	0.38%	115.7	0.23%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.039e+00	1.0000	5.0	0.95%	368.4	0.75%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-1.013e+00	1.0000	51.0	9.71%	4545.1	9.20%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.010e+00	1.0000	46.0	8.76%	4088.0	8.28%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.009e+00	1.0000	9.0	1.71%	724.5	1.47%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.001e+00	1.0000	152.0	28.95%	13933.5	28.21%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-9.917e-01	1.0000	16.0	3.05%	1356.6	2.75%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-9.810e-01	1.0000	21.0	4.00%	1813.9	3.67%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-9.662e-01	1.0000	22.0	4.19%	1910.2	3.87%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-9.642e-01	1.0000	6.0	1.14%	469.8	0.95%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-9.611e-01	1.0000	29.0	5.52%	2552.2	5.17%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-9.561e-01	1.0000	54.0	10.29%	4857.2	9.83%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-9.506e-01	1.0000	20.0	3.81%	1734.7	3.51%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-9.498e-01	1.0000	1.0	0.19%	46.7	0.09%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-9.471e-01	1.0000	4.0	0.76%	297.1	0.60%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-9.424e-01	1.0000	17.0	3.24%	1464.6	2.96%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-9.303e-01	1.0000	3.0	0.57%	213.0	0.43%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-9.023e-01	1.0000	2.0	0.38%	131.0	0.27%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-8.993e-01	1.0000	4.0	0.76%	305.6	0.62%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-8.988e-01	1.0000	20.0	3.81%	1755.6	3.55%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-8.875e-01	1.0000	12.0	2.29%	1028.9	2.08%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-8.851e-01	1.0000	53.0	10.10%	4811.3	9.74%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-8.794e-01	1.0000	7.0	1.33%	577.1	1.17%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-8.756e-01	1.0000	18.0	3.43%	1581.1	3.20%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-8.733e-01	1.0000	37.0	7.05%	3335.3	6.75%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-8.726e-01	1.0000	20.0	3.81%	1766.9	3.58%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-8.725e-01	1.0000	21.0	4.00%	1858.8	3.76%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-8.716e-01	1.0000	9.0	1.71%	760.4	1.54%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-8.666e-01	1.0000	24.0	4.57%	2137.4	4.33%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-8.643e-01	1.0000	27.0	5.14%	2415.3	4.89%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-8.356e-01	1.0000	6.0	1.14%	497.5	1.01%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-8.313e-01	1.0000	6.0	1.14%	498.9	1.01%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-8.209e-01	1.0000	8.0	1.52%	683.0	1.38%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-8.193e-01	1.0000	68.0	12.95%	6256.4	12.66%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-8.146e-01	1.0000	1.0	0.19%	55.6	0.11%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-8.104e-01	1.0000	16.0	3.05%	1423.4	2.88%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-7.699e-01	1.0000	2.0	0.38%	147.9	0.30%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-7.680e-01	1.0000	30.0	5.71%	2745.9	5.56%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-7.650e-01	1.0000	8.0	1.52%	699.6	1.42%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-7.574e-01	1.0000	21.0	4.00%	1911.9	3.87%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-7.562e-01	1.0000	3.0	0.57%	240.4	0.49%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-7.562e-01	1.0000	5.0	0.95%	424.0	0.86%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-7.480e-01	1.0000	38.0	7.24%	3505.3	7.10%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-7.433e-01	1.0000	5.0	0.95%	428.0	0.87%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-7.408e-01	1.0000	4.0	0.76%	335.4	0.68%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-7.391e-01	1.0000	5.0	0.95%	428.8	0.87%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-7.382e-01	1.0000	7.0	1.33%	614.2	1.24%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-7.335e-01	1.0000	3.0	0.57%	244.0	0.49%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-7.333e-01	1.0000	2.0	0.38%	152.2	0.31%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-7.280e-01	1.0000	3.0	0.57%	245.8	0.50%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-7.186e-01	1.0000	82.0	15.62%	7655.6	15.50%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-7.175e-01	1.0000	14.0	2.67%	1275.5	2.58%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-7.054e-01	1.0000	2.0	0.38%	156.4	0.32%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-7.038e-01	1.0000	7.0	1.33%	624.7	1.26%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-7.011e-01	1.0000	6.0	1.14%	531.3	1.08%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-7.008e-01	1.0000	14.0	2.67%	1282.7	2.60%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-6.951e-01	1.0000	1.0	0.19%	65.1	0.13%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-6.948e-01	1.0000	42.0	8.00%	3917.0	7.93%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-6.831e-01	1.0000	6.0	1.14%	536.1	1.09%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-6.755e-01	1.0000	11.0	2.10%	1010.3	2.05%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-6.649e-01	1.0000	25.0	4.76%	2336.6	4.73%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-6.546e-01	1.0000	3.0	0.57%	259.9	0.53%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-6.510e-01	1.0000	4.0	0.76%	355.5	0.72%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-6.441e-01	1.0000	14.0	2.67%	1307.1	2.65%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-6.315e-01	1.0000	132.0	25.14%	12456.3	25.21%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-6.257e-01	1.0000	112.0	21.33%	10578.3	21.41%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-6.031e-01	1.0000	29.0	5.52%	2754.0	5.57%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-6.024e-01	1.0000	3.0	0.57%	271.0	0.55%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-6.012e-01	1.0000	24.0	4.57%	2280.5	4.62%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-5.973e-01	1.0000	29.0	5.52%	2758.1	5.58%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-5.960e-01	1.0000	33.0	6.29%	3139.3	6.35%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-5.890e-01	1.0000	42.0	8.00%	3999.1	8.10%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-5.831e-01	1.0000	7.0	1.33%	663.9	1.34%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-5.756e-01	1.0000	39.0	7.43%	3725.3	7.54%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-5.729e-01	1.0000	9.0	1.71%	860.5	1.74%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-5.700e-01	1.0000	53.0	10.10%	5060.7	10.24%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-5.649e-01	1.0000	1.0	0.19%	79.1	0.16%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-5.536e-01	1.0000	14.0	2.67%	1351.4	2.74%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-5.524e-01	1.0000	31.0	5.90%	2981.4	6.04%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-5.491e-01	1.0000	1.0	0.19%	81.7	0.17%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-5.464e-01	1.0000	10.0	1.90%	968.9	1.96%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-5.459e-01	1.0000	2.0	0.38%	183.9	0.37%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-5.414e-01	1.0000	1.0	0.19%	82.3	0.17%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-5.383e-01	1.0000	8.0	1.52%	777.5	1.57%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-5.310e-01	1.0000	38.0	7.24%	3667.6	7.42%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-5.214e-01	1.0000	15.0	2.86%	1465.2	2.97%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-5.118e-01	1.0000	1.0	0.19%	86.9	0.18%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-5.118e-01	1.0000	1.0	0.19%	86.2	0.17%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-5.091e-01	1.0000	20.0	3.81%	1956.6	3.96%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-4.991e-01	1.0000	4.0	0.76%	396.6	0.80%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-4.989e-01	1.0000	10.0	1.90%	990.1	2.00%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-4.988e-01	1.0000	11.0	2.10%	1088.4	2.20%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.982e-01	1.0000	6.0	1.14%	596.0	1.21%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-4.911e-01	1.0000	1.0	0.19%	89.0	0.18%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-4.864e-01	1.0000	8.0	1.52%	799.6	1.62%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-4.844e-01	1.0000	1.0	0.19%	90.2	0.18%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-4.806e-01	1.0000	3.0	0.57%	300.1	0.61%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-4.749e-01	1.0000	6.0	1.14%	605.2	1.23%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-4.744e-01	1.0000	7.0	1.33%	705.4	1.43%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-4.680e-01	1.0000	20.0	3.81%	1984.7	4.02%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-4.614e-01	1.0000	21.0	4.00%	2086.6	4.22%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-4.587e-01	1.0000	1.0	0.19%	94.0	0.19%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-4.562e-01	1.0000	38.0	7.24%	3735.7	7.56%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-4.559e-01	1.0000	7.0	1.33%	713.4	1.44%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-4.501e-01	1.0000	6.0	1.14%	615.5	1.25%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-4.495e-01	1.0000	18.0	3.43%	1802.4	3.65%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-4.468e-01	1.0000	4.0	0.76%	413.6	0.84%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-4.419e-01	1.0000	15.0	2.86%	1513.4	3.06%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-4.314e-01	1.0000	67.0	12.76%	6548.1	13.25%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-4.294e-01	1.0000	7.0	1.33%	725.9	1.47%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-4.290e-01	1.0000	1.0	0.19%	99.6	0.20%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-4.233e-01	1.0000	1.0	0.19%	100.9	0.20%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-4.141e-01	1.0000	9.0	1.71%	934.3	1.89%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-4.129e-01	1.0000	30.0	5.71%	3002.4	6.08%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-4.124e-01	1.0000	45.0	8.57%	4456.3	9.02%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-4.071e-01	1.0000	27.0	5.14%	2715.8	5.50%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-3.955e-01	1.0000	33.0	6.29%	3311.9	6.70%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-3.934e-01	1.0000	12.0	2.29%	1248.0	2.53%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-3.900e-01	1.0000	38.0	7.24%	3803.6	7.70%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-3.894e-01	1.0000	4.0	0.76%	434.6	0.88%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-3.892e-01	1.0000	15.0	2.86%	1549.6	3.14%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-3.846e-01	1.0000	82.0	15.62%	8051.2	16.30%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-3.812e-01	1.0000	1.0	0.19%	108.3	0.22%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-3.763e-01	1.0000	1.0	0.19%	109.7	0.22%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-3.709e-01	1.0000	10.0	1.90%	1060.2	2.15%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-3.702e-01	1.0000	5.0	0.95%	547.5	1.11%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-3.698e-01	1.0000	26.0	4.95%	2652.2	5.37%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-3.632e-01	1.0000	28.0	5.33%	2855.1	5.78%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-3.620e-01	1.0000	1.0	0.19%	112.8	0.23%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.574e-01	1.0000	1.0	0.19%	113.5	0.23%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-3.574e-01	1.0000	1.0	0.19%	113.5	0.23%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-3.505e-01	1.0000	3.0	0.57%	342.4	0.69%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-3.502e-01	1.0000	14.0	2.67%	1478.8	2.99%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-3.471e-01	1.0000	29.0	5.52%	2970.4	6.01%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-3.448e-01	1.0000	25.0	4.76%	2578.9	5.22%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-3.436e-01	1.0000	7.0	1.33%	769.2	1.56%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-3.424e-01	1.0000	21.0	4.00%	2184.4	4.42%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-3.325e-01	1.0000	3.0	0.57%	349.9	0.71%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-3.311e-01	1.0000	1.0	0.19%	119.3	0.24%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-3.251e-01	1.0000	3.0	0.57%	352.4	0.71%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-3.198e-01	1.0000	10.0	1.90%	1095.0	2.22%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-3.189e-01	1.0000	1.0	0.19%	122.7	0.25%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-3.156e-01	1.0000	8.0	1.52%	890.5	1.80%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-3.132e-01	1.0000	15.0	2.86%	1609.2	3.26%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-3.107e-01	1.0000	3.0	0.57%	358.7	0.73%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-3.080e-01	1.0000	8.0	1.52%	895.9	1.81%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-3.008e-01	1.0000	2.0	0.38%	248.0	0.50%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-3.003e-01	1.0000	29.0	5.52%	3023.0	6.12%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-2.955e-01	1.0000	2.0	0.38%	250.3	0.51%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-2.870e-01	1.0000	33.0	6.29%	3436.7	6.96%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-2.851e-01	1.0000	1.0	0.19%	131.8	0.27%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.816e-01	1.0000	1.0	0.19%	132.4	0.27%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.812e-01	1.0000	21.0	4.00%	2246.2	4.55%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-2.799e-01	1.0000	2.0	0.38%	256.9	0.52%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-2.749e-01	1.0000	2.0	0.38%	258.9	0.52%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-2.704e-01	1.0000	13.0	2.48%	1443.7	2.92%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.688e-01	1.0000	4.0	0.76%	490.4	0.99%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-2.613e-01	1.0000	5.0	0.95%	605.7	1.23%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.565e-01	1.0000	5.0	0.95%	608.4	1.23%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-2.523e-01	1.0000	1.0	0.19%	141.8	0.29%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-2.497e-01	1.0000	4.0	0.76%	501.9	1.02%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-2.492e-01	1.0000	26.0	4.95%	2788.5	5.64%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.344e-01	1.0000	15.0	2.86%	1686.6	3.41%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.297e-01	1.0000	2.0	0.38%	278.4	0.56%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.276e-01	1.0000	2.0	0.38%	279.5	0.57%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-2.245e-01	1.0000	12.0	2.29%	1384.6	2.80%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-2.245e-01	1.0000	12.0	2.29%	1384.7	2.80%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-2.232e-01	1.0000	25.0	4.76%	2723.1	5.51%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-2.210e-01	1.0000	1.0	0.19%	152.1	0.31%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.158e-01	1.0000	1.0	0.19%	154.7	0.31%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-2.157e-01	1.0000	2.0	0.38%	285.7	0.58%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-2.141e-01	1.0000	8.0	1.52%	968.1	1.96%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-2.128e-01	1.0000	19.0	3.62%	2125.8	4.30%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-2.099e-01	1.0000	14.0	2.67%	1610.2	3.26%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-2.018e-01	1.0000	3.0	0.57%	415.4	0.84%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.976e-01	1.0000	14.0	2.67%	1625.1	3.29%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.952e-01	1.0000	14.0	2.67%	1628.6	3.30%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.893e-01	1.0000	28.0	5.33%	3081.4	6.24%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.851e-01	1.0000	1.0	0.19%	167.8	0.34%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.827e-01	1.0000	3.0	0.57%	429.0	0.87%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.785e-01	1.0000	3.0	0.57%	431.2	0.87%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.709e-01	1.0000	2.0	0.38%	311.2	0.63%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.628e-01	1.0000	65.0	12.38%	6839.8	13.85%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.604e-01	1.0000	8.0	1.52%	1024.5	2.07%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.589e-01	1.0000	13.0	2.48%	1571.5	3.18%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.482e-01	1.0000	17.0	3.24%	2014.5	4.08%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.468e-01	1.0000	1.0	0.19%	187.1	0.38%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.423e-01	1.0000	40.0	7.62%	4397.5	8.90%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.419e-01	1.0000	13.0	2.48%	1597.0	3.23%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.315e-01	1.0000	5.0	0.95%	715.5	1.45%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-1.306e-01	1.0000	12.0	2.29%	1507.4	3.05%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-1.304e-01	1.0000	4.0	0.76%	596.2	1.21%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.249e-01	1.0000	13.0	2.48%	1626.1	3.29%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.248e-01	1.0000	15.0	2.86%	1843.1	3.73%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.179e-01	1.0000	14.0	2.67%	1748.4	3.54%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.168e-01	1.0000	3.0	0.57%	486.7	0.99%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.164e-01	1.0000	5.0	0.95%	734.2	1.49%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.068e-01	1.0000	1.0	0.19%	215.7	0.44%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.046e-01	1.0000	24.0	4.57%	2847.1	5.76%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.032e-01	1.0000	1.0	0.19%	218.5	0.44%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-9.931e-02	1.0000	7.0	1.33%	997.9	2.02%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-9.648e-02	1.0000	7.0	1.33%	1002.6	2.03%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-8.924e-02	1.0000	1.0	0.19%	231.4	0.47%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-8.692e-02	1.0000	16.0	3.05%	2037.1	4.12%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-8.082e-02	1.0000	14.0	2.67%	1833.2	3.71%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-7.925e-02	1.0000	10.0	1.90%	1386.8	2.81%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-7.419e-02	1.0000	2.0	0.38%	404.9	0.82%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-6.627e-02	1.0000	3.0	0.57%	558.4	1.13%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-6.327e-02	1.0000	1.0	0.19%	262.5	0.53%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-5.865e-02	1.0000	2.0	0.38%	430.7	0.87%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-5.822e-02	1.0000	4.0	0.76%	709.1	1.44%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-5.332e-02	1.0000	4.0	0.76%	721.8	1.46%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-4.959e-02	1.0000	5.0	0.95%	862.4	1.75%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-4.433e-02	1.0000	13.0	2.48%	1846.1	3.74%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-4.215e-02	1.0000	7.0	1.33%	1140.6	2.31%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-3.711e-02	1.0000	26.0	4.95%	3338.2	6.76%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-3.459e-02	1.0000	2.0	0.38%	488.1	0.99%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-2.746e-02	1.0000	10.0	1.90%	1581.9	3.20%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-2.058e-02	1.0000	1.0	0.19%	365.8	0.74%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.639e-02	1.0000	2.0	0.38%	569.1	1.15%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.475e-02	1.0000	3.0	0.57%	742.0	1.50%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-9.348e-03	1.0000	2.0	0.38%	629.3	1.27%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-7.471e-03	1.0000	7.0	1.33%	1403.8	2.84%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-2.767e-03	1.0000	2.0	0.38%	757.5	1.53%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	191.8	0.39%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	30.5	0.06%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	55.7	0.11%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	30.6	0.06%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	11.8	0.02%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	7.6	0.02%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	0.000e+00	1.0000	0.0	0.00%	164.5	0.33%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	80.4	0.16%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	25.9	0.05%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	70.4	0.14%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	62.5	0.13%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	50.3	0.10%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	23.6	0.05%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	10.5	0.02%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	50.6	0.10%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	99.7	0.20%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	29.7	0.06%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	2.0	0.00%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	21.1	0.04%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	37.6	0.08%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	0.000e+00	1.0000	0.0	0.00%	61.9	0.13%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	16.1	0.03%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	141.4	0.29%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	3.2	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	10.9	0.02%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	43.1	0.09%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	13.3	0.03%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	65.5	0.13%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	43.8	0.09%