Information for 6-GGGTASAATWTCT (Motif 9)

A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G A T C G T A A C G T A C G T A T G C A C G T C G T A A T G C A G T C A G T C
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 23.1bp
Average Position of motif in Background41.1 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGGTASAATWTCT
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGGTASAATWTCT
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGGTASAATWTCT
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGGTASAATWTCT
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGGTASAATWTCT
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGGTASAATWTCT-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGTASAATWTCT-
TTAAGAACAATAAATT
 A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGTASAATWTCT
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGGTASAATWTCT
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGTASAATWTCT----
GGGAACACAATGTTCCC
 A C T G A C T G A T C G A C G T C G T A T A C G C G T A C G T A A C G T G C T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C