Information for 5-CTCTGAATGBTAT (Motif 8)

A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T
Reverse Opposite:
C G T A A C G T C T G A T C G A G T A C C G T A A G C T A G C T A G T C C G T A C T A G C G T A C T A G
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.0 +/- 31.9bp
Average Position of motif in Background58.3 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTCTGAATGBTAT----
--TTGAATGAAATTCGA
 A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAATGBTAT
DCTCAGCAGG----
 A C G T A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGAATGBTAT-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTCTGAATGBTAT-
--BTGABTGACAGS
 A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCTGAATGBTAT
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTCTGAATGBTAT
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTCTGAATGBTAT---
NGTAGGTTGGCATNNN
 A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTCTGAATGBTAT-
--NTGATTGACAGN
 A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTCTGAATGBTAT--
GYCTGGYYTNTGTCA
 A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTCTGAATGBTAT---
----AGATGCAATCCC
 A G T C A C G T A G T C C G A T A C T G C T G A C T G A A C G T A C T G A C G T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C