Information for 4-GRTATKTGCATTK (Motif 6)

A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A A C G T A C T G A T G C C G T A G T C A C G T A A C G T C T G A A G T C A G T C
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.6 +/- 26.8bp
Average Position of motif in Background49.1 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GRTATKTGCATTK
TTCATTTGCATAT
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GRTATKTGCATTK
---ATTTGCATAT
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GRTATKTGCATTK
---ATTTGCATAA
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GRTATKTGCATTK
---ATTTGCATA-
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GRTATKTGCATTK
---ATTTGCATA-
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GRTATKTGCATTK
BTVATTWGCATA-
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GRTATKTGCATTK
-ATATTTACATA-
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GRTATKTGCATTK
CTCATTTGCATW-
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GRTATKTGCATTK-
--AATTTGCATANT
 A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G A C G T
A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GRTATKTGCATTK--
TNTAATTTGCATANNN
 A C G T A C T G C T A G A G C T T C G A A C G T A C G T A C G T A T C G A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A