Information for 9-CCTCCCAGACTTCAGA (Motif 27)

A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C C G A T A C T G C T G A C G T A C T A G A C G T A G T C A G C T A C T G C T A G A C T G C G T A A C T G A C T G
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.903
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.8 +/- 27.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTCCCAGACTTCAGA
ATTTCCCAGVAKSCY--
 A C G T A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTCCCAGACTTCAGA
CNGTCCTCCC----------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCTCCCAGACTTCAGA
CAAATCCAGACATCACA
 A C G T A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CCTCCCAGACTTCAGA
NNNTCCATCCCATAANN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCTCCCAGACTTCAGA
-ATGCCAGACN-----
 A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCTCCCAGACTTCAGA
CCCCTCCCCCAC------
 A C G T A C G T A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CCTCCCAGACTTCAGA
-TGCCCAGNHW-----
 A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCCAGACTTCAGA
YCCGCCCACGCN-----
 A C G T A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCTCCCAGACTTCAGA
----CCAGACAG----
 A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCTCCCAGACTTCAGA
----CCAGACRSVB--
 A G T C A G T C A C G T A G T C A G T C A G T C C T G A A C T G G T C A A G T C A C G T A G C T A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T