Information for 3-KGAASTTCCA (Motif 23)

A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
Reverse Opposite:
C A G T C A T G A T C G T G C A C T G A A T G C A C G T A C G T A G T C G T C A
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.704
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif417.1
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets43.8 +/- 26.7bp
Average Position of motif in Background48.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:KGAASTTCCA
GGAAATTCCC
 A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:KGAASTTCCA
GGAAATTCCC
 A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:KGAASTTCCA
GGAAANCCCC
 A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-KGAASTTCCA-
GGGAAATCCCCN
 A C G T A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------KGAASTTCCA
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KGAASTTCCA
GGAAATCCCC
 A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

ETV6/MA0645.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---KGAASTTCCA
AGCGGAAGTG---
 A C G T A C G T A C G T A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----KGAASTTCCA
AVCAGGAAGT----
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--KGAASTTCCA
CCGGAAGTGGC-
 A C G T A C G T A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----KGAASTTCCA
ACVAGGAAGT----
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A T A C G A G C T A C G T A T G C G T A C G T C A
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T