Information for 1-TTAAAGCACARTCCCA (Motif 2)

G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
Reverse Opposite:
A C G T T A C G C T A G T C A G G T C A A G C T C G A T A C T G A C G T A C T G A G T C C A G T A C G T C G A T C T G A C G T A
p-value:1e-12
log p-value:-2.897e+01
Information Content per bp:1.701
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.9 +/- 23.2bp
Average Position of motif in Background58.4 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTAAAGCACARTCCCA
--AAACCACANN----
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTAAAGCACARTCCCA
-NAAACCACAG-----
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAAAGCACARTCCCA
--AAACCACAGAN---
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTAAAGCACARTCCCA
--AAACCACAGC----
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGCACARTCCCA
TCCAATCCACA------
 A C G T G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTAAAGCACARTCCCA
-NWAACCACADNN---
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTAAAGCACARTCCCA
SSAATCCACANN----
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TTAAAGCACARTCCCA
--AAACCGCAA-----
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTAAAGCACARTCCCA
--AAACCGCAAA----
 G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGCACARTCCCA-----
AATAAAGAACAATAGAATTTCA
 A C G T G A C T A G C T C G T A C G T A G C T A T C A G G T A C G T C A A G T C C G T A T C G A A C G T A G T C G A T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A