Information for 10-CTTTCCAGCAGGG (Motif 15)

A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G
Reverse Opposite:
G A T C G A T C A T G C G A C T A C T G G A T C A C G T C T A G A C T G C T G A C T G A C G T A T A C G
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.704
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif62.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets53.4 +/- 16.0bp
Average Position of motif in Background47.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CTTTCCAGCAGGG--
---CACAGCAGGGGG
 A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTTTCCAGCAGGG--
CCACACAGCAGGAGA
 A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTTTCCAGCAGGG----
--DCHCAGCAGGRGGCC
 A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTTTCCAGCAGGG--
CCACACAGCAGGAGA
 A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTTCCAGCAGGG
TTTCCCAGAAN--
 A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTTTCCAGCAGGG
--DCTCAGCAGG-
 A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTTCCAGCAGGG--
GAGCACAGCAGGACA
 A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCCAGCAGGG-
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCCAGCAGGG-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCCAGCAGGG-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C G A C T A G C T A G C T T G A C A G T C C G T A C A T G T G A C C G T A A T C G C T A G C T A G A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T