Information for 5-WAACCRMAAC (Motif 5)

G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C
Reverse Opposite:
A C T G G A C T C A G T C A G T G A C T C T A G T A C G C G A T A C G T C G T A
p-value:1e-16
log p-value:-3.890e+01
Information Content per bp:1.635
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif8.36%
Number of Background Sequences with motif1168.4
Percentage of Background Sequences with motif2.48%
Average Position of motif in Targets52.9 +/- 27.5bp
Average Position of motif in Background51.9 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:WAACCRMAAC
AAACCGCAA-
 G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:WAACCRMAAC
AAACCGCAAA
 G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:WAACCRMAAC
AAACCACANN
 G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:WAACCRMAAC
AAACCACAGC
 G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-WAACCRMAAC
NAAACCACAG-
 A C G T G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:WAACCRMAAC
-AACCGANA-
 G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--WAACCRMAAC---
ATAAACCGAAACCAA
 A C G T A C G T G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---WAACCRMAAC-
TCGAAACCGAAACT
 A C G T A C G T A C G T G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:WAACCRMAAC-
AAACCACAGAN
 G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-WAACCRMAAC-
NWAACCACADNN
 A C G T G C A T T G C A C G T A A T G C G A T C C T G A G T C A G T C A C T G A G T A C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C