Information for 18-CCATCACAAGAGC (Motif 19)

A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C T G C G T A A C G T A C T G A C T G
p-value:1e-5
log p-value:-1.187e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.0 +/- 10.7bp
Average Position of motif in Background57.2 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCATCACAAGAGC
--GTCACATGAY-
 A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

TFEC/MA0871.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCATCACAAGAGC
--ATCACGTGAC-
 A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
A C G T A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCATCACAAGAGC--
ATGTCACAACAACAC
 A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCATCACAAGAGC
-GGTCACGTGG--
 A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCATCACAAGAGC-
CAAACAACAACACCT
 A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCATCACAAGAGC
--ATCACGTGAC-
 A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCATCACAAGAGC
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCATCACAAGAGC
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCATCACAAGAGC
--ATCACGTGAC-
 A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C
A C G T A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCATCACAAGAGC-
--GTCACGTGACYV
 A G T C A G T C C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C