Information for 5-GTBAVCTCHVGGCTVT (Motif 7)

A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A G T C G T A C A G T C C A G T T C A G C G T A A C T G A C G T A C G T T A G C C G T A A G T C
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.756
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 28.3bp
Average Position of motif in Background34.2 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:GTBAVCTCHVGGCTVT
----------NGCTN-
 A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:2
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GTBAVCTCHVGGCTVT
TGATTGTTAACAGTTGG----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTBAVCTCHVGGCTVT
GTGACCTT--------
 A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTBAVCTCHVGGCTVT
NNNGTGACCTTTGNNN---
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GTBAVCTCHVGGCTVT
-TCACCTCTGGGCAG-
 A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTBAVCTCHVGGCTVT
-TGACCYCT-------
 A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTBAVCTCHVGGCTVT
-TGACCTYA-------
 A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GTBAVCTCHVGGCTVT
NTTTTAGTTAACNNAGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GTBAVCTCHVGGCTVT
NNNNTGACCTTTNNNN---
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GTBAVCTCHVGGCTVT
NNNTTAGTTAACTNANN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A T C G A A G T C C G A T A G T C G C T A T A C G A C T G A C T G A G T C A C G T T C G A A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T