Information for 2-CCCWGGATGGMGCTGG (Motif 3)

A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
Reverse Opposite:
T A G C A G T C C G T A A C T G A G T C C A T G A G T C A T G C T C G A A G C T A G T C A T G C C G T A C T A G A C T G A C T G
p-value:1e-12
log p-value:-2.776e+01
Information Content per bp:1.790
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 28.6bp
Average Position of motif in Background61.4 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCWGGATGGMGCTGG--
---AAGGKGRCGCAGGCA
 A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCCWGGATGGMGCTGG--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCCWGGATGGMGCTGG
NNVDGGGYGGGGCYN-
 A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCCWGGATGGMGCTGG
CACCCCCGGGGGGG-----
 A C G T A C G T A C G T A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CCCWGGATGGMGCTGG
ACCCCCCCGGGGGGN-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CCCWGGATGGMGCTGG
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CCCWGGATGGMGCTGG
-------CGGAGC---
 A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:CCCWGGATGGMGCTGG
----------NGCTN-
 A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCCWGGATGGMGCTGG
GGCACCCAGGGGTGC-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCCWGGATGGMGCTGG
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G C A T A T C G A C T G C T G A A C G T A T C G A C T G G T A C A C T G A G T C C G A T A C T G A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T