Information for 6-AATGACCTNC (Motif 22)

C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C
Reverse Opposite:
C T A G G T A C C G T A A C T G C T A G A C G T A T G C C G T A A C G T A C G T
p-value:1e-5
log p-value:-1.171e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif6.80%
Number of Background Sequences with motif326.7
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets57.9 +/- 27.5bp
Average Position of motif in Background49.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AATGACCTNC
--TGACCTYA
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AATGACCTNC
--TGACCT--
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AATGACCTNC-
-ATGACCTTGA
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AATGACCTNC--
--TGACCTTGAT
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AATGACCTNC
--TGACCYCT
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATGACCTNC
-GTGACCTT-
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------AATGACCTNC
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATGACCTNC-
NATGACCTTGA
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATGACCTNC-
-NTGACCTTGA
 C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AATGACCTNC
NTAATGAGCT--
 A C G T A C G T C G T A C G T A A C G T A T C G G T C A A G T C A G T C A C G T C A T G G A T C
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T