Information for 9-CACATACTAMACATCC (Motif 7)

A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
Reverse Opposite:
A C T G A C T G C T G A A C G T A C T G A C G T A C G T A C G T C G T A C A T G A C G T C G T A A C G T C T A G C G A T A C T G
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.756
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 25.2bp
Average Position of motif in Background34.0 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACATACTAMACATCC
-AAATAAGAAAAAAC-
 A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CACATACTAMACATCC
CACATTCCAT------
 A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CACATACTAMACATCC
ACCACTTAA---------
 A C G T A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CACATACTAMACATCC
GCACGTACCC-------
 A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CACATACTAMACATCC
CGAAGCACACAAAATA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CACATACTAMACATCC
ACCACTTAA---------
 A C G T A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CACATACTAMACATCC
TCCATCCCATAATACTC----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CACATACTAMACATCC
AGCGGCACACACGCAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CACATACTAMACATCC
GCACGTAY---------
 A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CACATACTAMACATCC
CATAACCACTTAACAAC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T C A A C G T C G T A G T A C G A C T G T C A G T C A T G C A G T A C C G T A A G C T A G T C T G A C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T A C G T A C G T A C G T A C G T