Information for 6-TGGTMAGGGCATA (Motif 6)

C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
Reverse Opposite:
A C G T G T C A G A C T A T C G A G T C G T A C G T A C A G C T C A T G T G C A A G T C G A T C C G T A
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.690
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets43.2 +/- 26.1bp
Average Position of motif in Background53.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGGTMAGGGCATA
---TNNGGGCAG-
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGGTMAGGGCATA
---TRAGGTCA--
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGGTMAGGGCATA
---NGTGGGCAT-
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGTMAGGGCATA---
NNNNTTGGGCACNNCN
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGTMAGGGCATA
-WDNCTGGGCA--
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGTMAGGGCATA
TGGGGAAGGGCM--
A C G T C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGGTMAGGGCATA
---CAAGGHCANV
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGTMAGGGCATA
-----AGGTCA--
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGTMAGGGCATA
----AAGGTCAC-
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGTMAGGGCATA-----
-NNNTNGGGCGTATNNTN
C G A T C A T G C T A G A C G T G T A C C T G A A C T G A C T G T C A G A T G C C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T