Information for 6-GARTWKTGTGATGGCA (Motif 3)

A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
Reverse Opposite:
A G C T A C T G A G T C G A T C C T G A A C G T A T G C C G T A A G T C C G T A G T A C C G T A T G C A A G C T G A C T A G T C
p-value:1e-12
log p-value:-2.880e+01
Information Content per bp:1.725
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 24.3bp
Average Position of motif in Background25.7 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
---AGGTGTGAAM---
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
--AAGGTGTKAA----
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA--
-TATTATGGGATGGATAA
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A A C G T A C G T
A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
---AGGTGTGA-----
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
--AAGGTGTGAA----
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GARTWKTGTGATGGCA
-----NTGTCAN----
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
--AAGGTGTGAAA---
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
---AGGTGTGA-----
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
--TAGGTGTGAAG---
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GARTWKTGTGATGGCA
--AAGGTGTGAAAAT-
 A C T G C G T A C T G A A C G T C G A T A C T G A C G T A C T G C G A T A T C G C G T A G A C T C T A G A C T G T A G C C T G A
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T