Information for 20-TCACCTTACAAGT (Motif 28)

A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G A T A C T G A C G T G T C A C G T A A C T G A C T G A C G T A T C G C G T A
p-value:1e-4
log p-value:-9.481e+00
Information Content per bp:1.940
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 16.5bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCACCTTACAAGT
TGACCTYA-----
 A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCACCTTACAAGT
GKVTCADRTTWC----
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTTACAAGT
GTGACCTT------
 A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCACCTTACAAGT
ATCACCCCAC----
 A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCACCTTACAAGT
NNACTTACCTN------
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCACCTTACAAGT
NTGACCTTGA----
 A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCACCTTACAAGT
---CCTTTGAWGT
 A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCACCTTACAAGT
GKMTCADRTTWC----
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCACCTTACAAGT
ATCACGTGAC----
 A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTTACAAGT
ATGACCTTGA----
 A C G T A C G T A T G C C G T A A G T C A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T