Information for 11-AGATGAACCT (Motif 25)

C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C G T A G T C A C G T
p-value:1e-5
log p-value:-1.290e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 21.4bp
Average Position of motif in Background42.8 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGATGAACCT
AGAGGAA---
 C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGATGAACCT
AGATAAGA--
 C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGATGAACCT
--ATAATCCC
 C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGATGAACCT-----
NNANTTGACCCCTNNNN
 A C G T A C G T C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGATGAACCT
AGATAASR--
 C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGATGAACCT
-CATGAC---
 C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGATGAACCT--
GGAAANTGAAACTNA
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGATGAACCT
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGATGAACCT-----
NNNGTGACCTTTGNNN
 A C G T C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGATGAACCT
---TGACCT-
 C G T A A C T G C G T A A C G T A C T G C G T A C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T