Information for 8-GTAGTAGCGA (Motif 21)

A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T G T A C C T A G A G T C A C G T C G T A A G T C C G A T G T C A A G T C
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.916
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.4 +/- 25.3bp
Average Position of motif in Background55.4 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTAGCGA--
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTAGCGA--
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTAGTAGCGA--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTAGTAGCGA--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGTAGCGA--
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTAGTAGCGA--
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTAGTAGCGA--
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTAGTAGCGA
----CAGCC-
 A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTAGCGA---------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTAGTAGCGA-----
NNNGTAACTANGNNA
 A C T G A C G T C G T A A C T G A C G T C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A