Information for 3-CCACTGSWKSKGGKCC (Motif 5)

A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
Reverse Opposite:
C A T G A C T G G T C A A T G C A G T C G T C A A T G C G T A C C G T A A T C G A G T C C G T A A C T G A C G T A C T G A C T G
p-value:1e-13
log p-value:-3.147e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 17.5bp
Average Position of motif in Background44.7 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCACTGSWKSKGGKCC
AATCGCACTGCATTCCG---
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCACTGSWKSKGGKCC
-CACAGCGGGGGGTC-
 A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCACTGSWKSKGGKCC
NCNCAGCGGGGGGTC-
 A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCACTGSWKSKGGKCC
NCGCAGCGGGGGGTC-
 A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCACTGSWKSKGGKCC
ATCCAC------------
 A C G T A C G T A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCACTGSWKSKGGKCC
DCHCAGCAGGRGGCC-
 A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCACTGSWKSKGGKCC
-CACAGCAGGGGG---
 A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCACTGSWKSKGGKCC
-CTTCGCGGGGGGTC-
 A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCACTGSWKSKGGKCC
CCACTTGAA-------
 A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCACTGSWKSKGGKCC
ACCACTTGAA-------
 A C G T A G T C A G T C C G T A A G T C A C G T A C T G A T G C C G A T A C T G A T C G A C G T A C T G A T C G A C G T A G T C G A T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T