Information for 25-CTAAGGCTGGCTT (Motif 46)

A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
Reverse Opposite:
C G T A T C G A C A T G G A T C G T A C C T G A C A T G G T A C G T A C A C G T A C G T G C T A T A C G
p-value:1e-5
log p-value:-1.379e+01
Information Content per bp:1.663
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif224.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets51.4 +/- 23.2bp
Average Position of motif in Background50.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTAAGGCTGGCTT
AGCCTCAGGCA-----
 A C G T A C G T A C G T A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTAAGGCTGGCTT
AGCCTCAGGCA-----
 A C G T A C G T A C G T A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTAAGGCTGGCTT
--TWGTCTGV---
 A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTAAGGCTGGCTT
CGCCTCAGGCA-----
 A C G T A C G T A C G T A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTAAGGCTGGCTT
---GGTCTGGCAT
 A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTAAGGCTGGCTT
TAAAAATGCTGACTT
 A C G T A C G T A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTAAGGCTGGCTT
-TAATCCCN----
 A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTAAGGCTGGCTT---
NGTAGGTTGGCATNNN
 A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTAAGGCTGGCTT-
----TGCTGACTCA
 A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CTAAGGCTGGCTT
ATGCCCTGAGGC------
 A C G T A C G T A C G T A C G T A C G T A T G C C A G T T G C A C G T A A C T G A C T G G A T C G A C T A C T G C T A G G T A C A C G T G A C T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T