Information for 23-CTCTCGATCAGCGCCC (Motif 43)

A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
Reverse Opposite:
T C A G T C A G C A T G T A G C A T C G A G T C C A G T C T A G T C G A A C G T A T G C A T C G C G T A C T A G C T G A C T A G
p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.677
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif110.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets41.9 +/- 22.6bp
Average Position of motif in Background48.2 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCGATCAGCGCCC
NNAATTCTCGNTNAN-----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTCTCGATCAGCGCCC
ACCACTCTCGGTCAC-----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCTCGATCAGCGCCC-
-----RGTTAGTGCCCY
 A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTCTCGATCAGCGCCC
AGTATTCTCGGTTGC-----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTCTCGATCAGCGCCC
NCTGTCAATCAN-----
 A C G T A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTCTCGATCAGCGCCC
GSCTGTCACTCA------
 A C G T A C G T A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTCTCGATCAGCGCCC
---TGAGTCAGCA---
 A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCGATCAGCGCCC
NSCACTYVAV--------
 A C G T A C G T A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTCTCGATCAGCGCCC
SCTGTCAVTCAV-----
 A C G T A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CTCTCGATCAGCGCCC-
-----GCTCCGCCCMCY
 A G T C A G C T A G T C G A C T A T G C T A C G T G C A A C G T A G T C G T C A A C T G T A G C A T C G G A T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T