Information for 21-GCCGSYCCCGGMTGGC (Motif 40)

A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C
Reverse Opposite:
A C T G A T G C A T G C T C G A A C G T A G T C A G T C T C A G A T C G A C T G C T G A A T G C A T G C A T C G A T C G A T G C
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.711
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif121.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets46.5 +/- 24.7bp
Average Position of motif in Background49.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCCGSYCCCGGMTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCGSYCCCGGMTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCCGSYCCCGGMTGGC-
----TGCCCNNAGGGCA
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCGSYCCCGGMTGGC
-NCCCCCCCGGGGGGN
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCGSYCCCGGMTGGC
-ACCCCCCCGGGGGGN
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCCGSYCCCGGMTGGC-
----TGCCCTGAGGGCA
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GCCGSYCCCGGMTGGC-
----TGCCCTGAGGGCA
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:GCCGSYCCCGGMTGGC--
---------GGTTGGCAT
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCGSYCCCGGMTGGC
--CACCCCCGGGGGGG
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCCGSYCCCGGMTGGC-----
-----NGTAGGTTGGCATNNN
 A T C G A T G C A T G C T A C G A T C G A G C T G T A C A T G C A G T C C T A G C T A G T G C A A C G T A T C G T A C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T