Information for 20-CCTSCCTCGGGDCAGC (Motif 39)

A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
Reverse Opposite:
C A T G T G A C A C G T A T C G G A T C T G A C A T G C G A T C A T C G C T G A C T A G A C T G A T C G G C T A A C T G C T A G
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.697
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif66.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets52.7 +/- 28.6bp
Average Position of motif in Background47.9 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTSCCTCGGGDCAGC
--TCCCNNGGGACN--
 A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTSCCTCGGGDCAGC
---GCCTCAGGGCAT-
 A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTSCCTCGGGDCAGC
--TGCCCTNGGGCA--
 A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCTSCCTCGGGDCAGC
---SCCTSAGGSCAW-
 A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTSCCTCGGGDCAGC
--TGCCCCAGGGCA--
 A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTSCCTCGGGDCAGC
--TGCCCCCGGGCA--
 A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCTSCCTCGGGDCAGC
CCCCCGCCCCCGCC-----
 A C G T A C G T A C G T A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTSCCTCGGGDCAGC
YCCGCCCACGCN-----
 A C G T A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTSCCTCGGGDCAGC
KGCCCTTCCCCA-------
 A C G T A C G T A C G T A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTSCCTCGGGDCAGC
-TCACCTCTGGGCAG-
 A G T C G T A C C G A T A T G C A G T C G A T C A G C T A T G C C T A G A T C G A C T G C T A G A T G C T G C A A C T G G T A C
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T