Information for 21-SCACAGCCWGGGA (Motif 38)

T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
Reverse Opposite:
A G C T A T G C G A T C A G T C C G T A A C T G A T C G A G T C A C G T A T C G A C G T A C T G A T C G
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.707
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif554.0
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets50.3 +/- 26.1bp
Average Position of motif in Background49.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:SCACAGCCWGGGA-
----WDNCTGGGCA
 T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-9
Orientation:forward strand
Alignment:---------SCACAGCCWGGGA
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--SCACAGCCWGGGA
GGCCACACCCAN---
 A C G T A C G T T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SCACAGCCWGGGA
-CACAGN------
 T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---SCACAGCCWGGGA
AAACCACAGAN-----
 A C G T A C G T A C G T T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--SCACAGCCWGGGA
GAGCACAGCAGGACA
 A C G T A C G T T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:SCACAGCCWGGGA
-CACAGCAGGGGG
 T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-SCACAGCCWGGGA
ACCACATCCTGT--
 A C G T T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--SCACAGCCWGGGA
CCACACAGCAGGAGA
 A C G T A C G T T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SCACAGCCWGGGA--
-CACAGCGGGGGGTC
 T A G C T G A C C G T A T A G C C G T A C T A G T A G C A G T C C G A T A C T G C T A G A T C G T C G A A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C