Information for 19-GTACACGGCTTTC (Motif 36)

A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C
Reverse Opposite:
A C T G C T G A G T C A C G T A A C T G A G T C A G T C A C T G A C G T A C T G A C G T G T C A A G T C
p-value:1e-8
log p-value:-1.864e+01
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 19.9bp
Average Position of motif in Background51.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTACACGGCTTTC---
TTTTACGACTTTCCAT
 A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTACACGGCTTTC
NNGGCCACGCCTTTN
 A C G T A C G T A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Ar/MA0007.3/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTACACGGCTTTC--
NGGTACACNGTGTTCCC
 A C G T A C G T A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C A C G T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

NR3C1/MA0113.3/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTACACGGCTTTC--
GGGTACATAATGTTCCC
 A C G T A C G T A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C A C G T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTACACGGCTTTC
NNTTTGCACACGGCCC--
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTACACGGCTTTC--
GGGAACACAATGTTCCC
 A C G T A C G T A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTACACGGCTTTC
TTTGCACACGGCAC--
 A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTACACGGCTTTC--
AGNACANNNTGTNCTN
 A C G T A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTACACGGCTTTC--
GRACAGWMTGTYCTB
 A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

CLOCK/MA0819.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTACACGGCTTTC
-AACACGTGTT--
 A C T G A C G T C G T A A G T C C G T A A G T C A C T G C T A G A G T C A C G T A C G T A G C T A G T C
A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T