Information for 17-MGGTCCTGTCTGM (Motif 31)

T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C T G C A T G T C G A A G T C A G T C A C G T
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.850
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.7 +/- 24.9bp
Average Position of motif in Background65.9 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:MGGTCCTGTCTGM
-----CTGTCTGG
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:MGGTCCTGTCTGM-----
-NNTNNTGTCTGGNNTNG
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:MGGTCCTGTCTGM
---VBSYGTCTGG
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:MGGTCCTGTCTGM
-----TWGTCTGV
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:MGGTCCTGTCTGM
----GCTGTG---
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MGGTCCTGTCTGM
NNGCACCTTTCTCC
 A C G T T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:MGGTCCTGTCTGM-----
-----CTGTCTGTCACCT
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:MGGTCCTGTCTGM-----
------TGTCTGDCACCT
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:MGGTCCTGTCTGM
----GCTGTCAA-
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:MGGTCCTGTCTGM-
----VBTGWCAGCB
 T G C A A C T G A C T G A G C T G T A C A G T C A C G T A C T G C G A T A G T C A C G T A C T G G T C A A C G T
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C