Information for 2-CCKAGAAGKGCAT (Motif 3)

A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
Reverse Opposite:
T C G A C G A T A T C G T A G C G T A C A T G C C G A T A C G T A T G C A G C T G T A C A C T G A T C G
p-value:1e-13
log p-value:-3.147e+01
Information Content per bp:1.753
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.7 +/- 28.3bp
Average Position of motif in Background68.1 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCKAGAAGKGCAT
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCKAGAAGKGCAT
ATTTCCAAGAA------
 A C G T A C G T A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCKAGAAGKGCAT
TTTCCCAGAAN-----
 A C G T A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCKAGAAGKGCAT
NCTTCCNGGAAGNN---
 A C G T A C G T A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCKAGAAGKGCAT
AACCCGGAAGTG---
 A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCKAGAAGKGCAT
TTCCNGGAAG-----
 A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCKAGAAGKGCAT
TTTCCTGGAAAGNNN-
 A C G T A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T

ELF1/MA0473.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCKAGAAGKGCAT
AACCCGGAAGTG---
 A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
C G T A G C T A G T A C T A G C G T A C A C T G A C T G C T G A G C T A C T A G G A C T T C A G A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCKAGAAGKGCAT
TTTCCTGGAAA-----
 A C G T A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCKAGAAGKGCAT
TTGACCGAGAATTCC--
 A C G T A C G T A C G T A C G T A T G C A G T C C A T G C T G A A T C G G T C A C G T A A T C G A C T G A T C G A T G C C G T A A G C T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T