Information for 14-TCGGGCCCCTTCT (Motif 28)

A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T
Reverse Opposite:
T C G A A C T G T G C A C G T A A C T G A C T G A T C G A C T G A T G C A G T C A G T C A C T G G T C A
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.8 +/- 28.9bp
Average Position of motif in Background42.2 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCGGGCCCCTTCT-
--SNGCACCTGCHS
 A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCGGGCCCCTTCT----
--GGCCYCCTGCTGDGH
 A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCGGGCCCCTTCT
GCTCGGSCTC-----
 A C G T A C G T A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGCCCCTTCT-
NTCGCGCGCCTTNNN
 A C G T A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCGGGCCCCTTCT-
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGCCCCTTCT-
ANCGCGCGCCCTTNN
 A C G T A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCGGGCCCCTTCT
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCGGGCCCCTTCT
---NNCACCTGNN
 A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCGGGCCCCTTCT---
----CCCCCTGCTGTG
 A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCGGGCCCCTTCT
----NCACCTGTN
 A C G T G T A C C T A G A C T G A T C G A G T C A T G C A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T