Information for 12-ACAGAACACACAC (Motif 24)

G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C
Reverse Opposite:
A T C G A C G T C T A G A C G T C A T G C G A T C A T G A G C T A C G T A T G C C G A T T A C G C A G T
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.763
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif53.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.6 +/- 29.2bp
Average Position of motif in Background44.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACAGAACACACAC--
AGCGGCACACACGCAA
 A C G T G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACAGAACACACAC-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACAGAACACACAC
-TCCAATCCACA-
 G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACAGAACACACAC--
---GGACACACCCCC
 G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C A C G T A C G T
A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACAGAACACACAC
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACAGAACACACAC--
CGAAGCACACAAAATA
 A C G T G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACAGAACACACAC
----NANANAC--
 G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C
A C G T A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACAGAACACACAC-
--GGACCACCCACG
 G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACAGAACACACAC
CAAAAGTAAACAAAG
 A C G T A C G T G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACAGAACACACAC-
TGCCAAAATAAACANN
 A C G T A C G T G T C A A T G C C G T A T A C G G T C A C T G A G A T C C G T A G T A C C G T A G A T C G T C A A T G C A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A