Information for 11-AGAGWCTGMTKKW (Motif 21)

C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
Reverse Opposite:
C G T A G T C A G T C A C G T A A C G T A G T C C G T A A C T G C G T A A G T C C G A T A G T C A C G T
p-value:1e-10
log p-value:-2.490e+01
Information Content per bp:1.852
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 9.9bp
Average Position of motif in Background53.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGAGWCTGMTKKW
-TWGTCTGV----
 C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAGWCTGMTKKW
-NNNANTGA----
 C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGAGWCTGMTKKW
NTNNNAGGAGTCTCNTN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGWCTGMTKKW
-CTGTCTGG----
 C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAGWCTGMTKKW
VBSYGTCTGG----
 A C G T C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGAGWCTGMTKKW
GGNGCGNCTGTTNNN
 A C G T A C G T C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGAGWCTGMTKKW
-----TTGATTGN
 C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGAGWCTGMTKKW
---CNGTGATTTN
 C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGAGWCTGMTKKW-
NNANTGATTGATNTTN
 A C G T A C G T C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGAGWCTGMTKKW
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G A T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G A T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T