Information for 11-MMCAGMCYCTSTYCCT (Motif 18)

T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C T A G C G T A A T C G C G T A A C T G T C A G A C T G A C G T A G T C A C G T A C T G A C T G A C G T
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.6 +/- 28.3bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MMCAGMCYCTSTYCCT--
--GAGCCCTTGTCCCTAA
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:MMCAGMCYCTSTYCCT--
--------CTGTTCCTGG
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---MMCAGMCYCTSTYCCT
AGCAACAGCCGCACC----
 A C G T A C G T A C G T T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--MMCAGMCYCTSTYCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:MMCAGMCYCTSTYCCT
-BCAGACWA-------
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:MMCAGMCYCTSTYCCT
------TKCTGTTCCA
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:MMCAGMCYCTSTYCCT
-CCAGACRSVB-----
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:MMCAGMCYCTSTYCCT
-CCAGACAG-------
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:MMCAGMCYCTSTYCCT--
--------CACTTCCTCT
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:MMCAGMCYCTSTYCCT
CACAGN----------
 T G C A G T A C A G T C C G T A A C T G G T C A A G T C A G T C A G T C A C G T A T G C A C G T A G T C A G T C A G T C A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T