Information for 10-KTYYMYAGTCTGTAAR (Motif 17)

A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G
Reverse Opposite:
A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C C G A T C T A G A C T G C T G A C T G A C T G A G T A C
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.2 +/- 6.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:KTYYMYAGTCTGTAAR
-----TWGTCTGV---
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:KTYYMYAGTCTGTAAR
---VBSYGTCTGG---
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KTYYMYAGTCTGTAAR
-----CTGTCTGG---
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KTYYMYAGTCTGTAAR--
-NNTNNTGTCTGGNNTNG
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:KTYYMYAGTCTGTAAR--
------TGTCTGDCACCT
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:KTYYMYAGTCTGTAAR-
-----AGGTCTCTAACC
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:KTYYMYAGTCTGTAAR
------GGTCTGGCAT
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:KTYYMYAGTCTGTAAR
--------GCTGTCAA
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:KTYYMYAGTCTGTAAR--
-----CTGTCTGTCACCT
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:KTYYMYAGTCTGTAAR----
---AGGACGCTGTAAAGGGA
 A C T G A G C T A G C T A G C T G T A C A G T C C G T A A C T G C G A T A G T C A C G T A C T G A C G T C G T A C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A