Information for 8-MMCAGMTGGSBCM (Motif 9)

T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
Reverse Opposite:
C A G T A T C G T C G A A T G C G T A C G A T C C G T A A C G T G T A C A C G T A C T G A C T G A C G T
p-value:1e-13
log p-value:-3.129e+01
Information Content per bp:1.583
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif8.14%
Number of Background Sequences with motif1297.6
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets48.9 +/- 25.5bp
Average Position of motif in Background50.1 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:MMCAGMTGGSBCM
AACAGATGGC---
 T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:2
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--MMCAGMTGGSBCM
VNAVCAGCTGGC---
 A C G T A C G T T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--MMCAGMTGGSBCM
NNVVCAGCTGBN---
 A C G T A C G T T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:MMCAGMTGGSBCM
AACAGATGGT---
 T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-MMCAGMTGGSBCM
NAACAGCTGG----
 A C G T T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:MMCAGMTGGSBCM
AACAKATGGY---
 T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-MMCAGMTGGSBCM
NAHCAGCTGD----
 A C G T T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-MMCAGMTGGSBCM
NAACAGCTGT----
 A C G T T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.81
Offset:1
Orientation:forward strand
Alignment:MMCAGMTGGSBCM
-VCAGCTGBNN--
 T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---MMCAGMTGGSBCM-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T T G C A T G A C G T A C G T C A A C T G T G C A G A C T C A T G C A T G T A C G A G C T T A G C G T C A A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G