Information for 3-ATGACTGCTGAGA (Motif 3)

T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A
Reverse Opposite:
A G C T A G T C C G A T A T G C C G T A C T A G A G T C C G T A A C T G A G C T A G T C G T C A A C G T
p-value:1e-26
log p-value:-6.198e+01
Information Content per bp:1.787
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.0 +/- 26.3bp
Average Position of motif in Background28.4 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATGACTGCTGAGA
-AATTTGCTGAC-
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATGACTGCTGAGA
---CCTGCTGAGH
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGACTGCTGAGA
CCCCCTGCTGTG-
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGACTGCTGAGA--
TNTCCTGCTGTGNNG
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGACTGCTGAGA---
-AAANTGCTGACTNAG
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A A C G T A C G T A C G T
A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGACTGCTGAGA--
AAAWWTGCTGACWWD
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ATGACTGCTGAGA--
-----TGCTGACTCA
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATGACTGCTGAGA--
---GGTGYTGACAGS
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A A C G T A C G T
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTGCTGAGA----
NAAAANTGCTGACTCAGC
 A C G T T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATGACTGCTGAGA
-AAAATGCTGACT
 T G C A A C G T T C A G C T G A G T A C A C G T A C T G A G T C A C G T A T C G C G T A T A C G T C G A
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T