Information for 24-AGGGCTCACAATA (Motif 28)

G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
Reverse Opposite:
G A C T T G C A A G C T C A G T A T C G C G A T T A C G C T G A A T C G A T G C G A T C G A T C C A G T
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.466
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.7 +/- 28.5bp
Average Position of motif in Background46.6 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AGGGCTCACAATA
CGAACAGTGCTCACTAT-
 A C G T A C G T A C G T A C G T A C G T G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGGGCTCACAATA
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGGGCTCACAATA
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTCACAATA--
CGAAGCACACAAAATA
 A C G T G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGGCTCACAATA
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGGCTCACAATA
AGRGGTCA-----
 G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGGCTCACAATA
-NGGATTAN----
 G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCTCACAATA
TGGGGCCCAC----
 A C G T G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCTCACAATA
CNAGGCCT-------
 A C G T A C G T G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGGGCTCACAATA
--NGCTN------
 G T C A C T A G C T A G T A C G T A G C G A C T A T G C G C T A T A G C G T C A T C G A A C G T C T G A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T