Information for 22-GTGGCCAAGCTAA (Motif 26)

A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
Reverse Opposite:
A C G T A C G T C T G A A T C G A G T C G A C T C A G T C A T G A T C G A T G C G A T C G C T A T A G C
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.463
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.8 +/- 14.3bp
Average Position of motif in Background37.7 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1/MA0509.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGGCCAAGCTAA-
GTTGCCATGGNAAC
 A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCAAGCTAA
NGTTGCCATGGCAA
 A C G T A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGGCCAAGCTAA
GAGSCCGAGC---
 A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGGCCAAGCTAA
GGTTGCCATGGCAA
 A C G T A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTGGCCAAGCTAA
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGGCCAAGCTAA
--TGCCAA-----
 A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGGCCAAGCTAA
CGTGCCAAG----
 A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCCAAGCTAA
CTGTTGCTAGGS---
 A C G T A C G T A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGGCCAAGCTAA--
GTTGCCATGGCAACM
 A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A A C G T A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTGGCCAAGCTAA-
CGGTTGCCATGGCAAC
 A C G T A C G T A T C G C G A T C A T G T A C G T A G C G T A C G T C A C T G A T C A G T A G C G A C T T C G A T G C A A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C