Information for 2-CCASCRGAGAKCGGAG (Motif 7)

A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G
Reverse Opposite:
G A T C A G C T A G T C A G T C A C T G T G A C C G A T A G T C A C G T A G T C A G C T C T A G A T G C A G C T A C T G A C T G
p-value:1e-13
log p-value:-3.083e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.3 +/- 18.6bp
Average Position of motif in Background53.1 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCASCRGAGAKCGGAG---
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCASCRGAGAKCGGAG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCASCRGAGAKCGGAG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCASCRGAGAKCGGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCASCRGAGAKCGGAG-
-----RGKGGGCGGAGC
 A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

ETV5/MA0765.1/Jaspar

Match Rank:6
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CCASCRGAGAKCGGAG---
---------ACCGGAAGTG
 A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CCASCRGAGAKCGGAG---
-----GGAGAAAGGTGCGA
 A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CCASCRGAGAKCGGAG
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCASCRGAGAKCGGAG
CCTGCTGAGH------
 A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.48
Offset:11
Orientation:reverse strand
Alignment:CCASCRGAGAKCGGAG-
-----------CGGAGC
 A G T C A G T C C T G A A T C G A G T C C T G A A C T G C G T A C T A G C G T A A C T G G T A C A C T G A C T G C T G A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C