Information for 10-CGTCAGCTGC (Motif 18)

G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C
Reverse Opposite:
T A C G A T G C C T G A A C T G T A G C A G C T A T C G T G C A T A G C C T A G
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.688
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif10.90%
Number of Background Sequences with motif2645.2
Percentage of Background Sequences with motif5.56%
Average Position of motif in Targets47.8 +/- 25.0bp
Average Position of motif in Background49.7 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CGTCAGCTGC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CGTCAGCTGC-
NNGCAGCTGTC
 G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGCTGC-
NNAGCAGCTGCT
 A C G T G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGTCAGCTGC
CAGCAGCTGN
 G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CGTCAGCTGC-
---CAGCTGNT
 G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CGTCAGCTGC-
-CGCAGCTGCG
 G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CGTCAGCTGC-
NNVVCAGCTGBN
 A C G T G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CGTCAGCTGC
NNACAGCTGC
 G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CGTCAGCTGC--
-AACAGCTGCAG
 G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAGCTGC-
NGNGACAGCTGCN
 A C G T A C G T G A T C A T C G A C G T A T G C T C G A A T C G G T A C A G C T T A C G A T G C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A