Information for 8-TGKGTTTGACCTTGTT (Motif 12)

C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
Reverse Opposite:
G C T A G T C A A G T C C T G A C G T A C T A G C T A G A G C T A G T C G C T A G T C A G T C A A T G C T G A C A T G C G C T A
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.742
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.4 +/- 22.6bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT
----BNTGDCCTTG--
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT
----NATGACCTTGA-
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGKGTTTGACCTTGTT
-----NTGACCTTGA-
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT
------TGACCTTGAT
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT--
-NNNNATGACCTTGANTN
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T A C G T A C G T
A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT
------TGACCTTGAV
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT
-----ATGACCTTGA-
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT
------TGACCTTGAN
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGKGTTTGACCTTGTT
-----GTGACCTT---
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.62
Offset:9
Orientation:forward strand
Alignment:TGKGTTTGACCTTGTT
---------CTTTGT-
 C A G T A T C G A C T G A T C G A C G T A C G T C G A T C T A G T C G A A G T C A G T C A C G T A G C T C T A G C A G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T