Information for 11-TAHCMGGMGG (Motif 13)

A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G
Reverse Opposite:
T G A C A G T C C A G T A T G C A G T C A C T G A T C G C A G T C A G T T C G A
p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.604
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif350.9
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets62.8 +/- 24.0bp
Average Position of motif in Background46.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAHCMGGMGG
DCTCAGCAGG
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

SPDEF/MA0686.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAHCMGGMGG--
-ACCCGGATGTA
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T A C G T
A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAHCMGGMGG-
-AACCGGAAGT
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T
A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

ELF3/MA0640.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAHCMGGMGG---
AACCCGGAAGTAA
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T A C G T A C G T
G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A

EHF/MA0598.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAHCMGGMGG--
AACCCGGAAGTA
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T A C G T
G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A

PB0077.1_Spdef_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAHCMGGMGG---
AANNATCCGGATGTNN
 A C G T A C G T A C G T A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T A C G T A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

ELF4/MA0641.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAHCMGGMGG--
AACCCGGAAGTG
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T A C G T
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAHCMGGMGG----
ATTGCCTCAGGCAAT
 A C G T A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAHCMGGMGG-
-AACCGGAAGT
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T
A C G T T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAHCMGGMGG---
-CACAGCAGGGGG
 A G C T G T C A G T C A T A G C T G A C T C A G A T C G G T C A T C A G A C T G A C G T A C G T A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G