Information for 1-RYTGTGGTTW (Motif 1)

T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A
Reverse Opposite:
G C A T C T G A T C G A A T G C G T A C C T G A T A G C T C G A C T G A A G C T
p-value:1e-99
log p-value:-2.299e+02
Information Content per bp:1.552
Number of Target Sequences with motif341.0
Percentage of Target Sequences with motif40.89%
Number of Background Sequences with motif5547.2
Percentage of Background Sequences with motif11.80%
Average Position of motif in Targets50.2 +/- 24.1bp
Average Position of motif in Background50.4 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-RYTGTGGTTW-
NNHTGTGGTTWN
 A C G T T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:RYTGTGGTTW-
-CTGTGGTTTN
 T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RYTGTGGTTW
NNTGTGGTTT
 T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RYTGTGGTTW
GTCTGTGGTTT
 A C G T T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RYTGTGGTTW
GCTGTGGTTT
 T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:RYTGTGGTTW
TTTGCGGTTT
 T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:RYTGTGGTTW
-TTGCGGTTT
 T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:RYTGTGGTTW
---GTGGAT-
 T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-RYTGTGGTTW-
CAGTGTGGTCGC
 A C G T T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-RYTGTGGTTW-
NTCGGTGGTCGC
 A C G T T C G A G A C T A G C T A T C G G A C T C A T G T A C G A G C T G A C T C G T A A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C