Information for 13-TCTGGTATGGAGG (Motif 9)

A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C G T A C G T C A C G A T C G T A G T A C A G T C C G T A A C T G C G T A
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 24.2bp
Average Position of motif in Background68.1 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCTGGTATGGAGG
GGTCTGGCAT-----
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGTATGGAGG
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCTGGTATGGAGG-
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGTATGGAGG
VBSYGTCTGG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCTGGTATGGAGG
NNHTGTGGTTWN----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCTGGTATGGAGG
CTGTCTGG--------
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGTATGGAGG
CTGTGGTTTN----
 A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TCTGGTATGGAGG-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TCTGGTATGGAGG
GTCTGTGGTTT-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TCTGGTATGGAGG
GCTGTGGTTT-----
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T