Information for 11-BCCTACTGAGGGA (Motif 8)

A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C T G C T A G T A C G
p-value:1e-11
log p-value:-2.598e+01
Information Content per bp:1.931
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.1 +/- 17.4bp
Average Position of motif in Background56.2 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--BCCTACTGAGGGA
CCCCCTGCTGTG---
 A C G T A C G T A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--BCCTACTGAGGGA
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:BCCTACTGAGGGA
-CCTGCTGAGH--
 A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--BCCTACTGAGGGA
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----BCCTACTGAGGGA
GGCCYCCTGCTGDGH--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--BCCTACTGAGGGA
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:BCCTACTGAGGGA
---TTCTNMGGAA
 A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:BCCTACTGAGGGA
-CCATATATGGNA
 A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:BCCTACTGAGGGA-
--HTGCTGAGTCAT
 A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T
A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--BCCTACTGAGGGA--
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A G T C A G T C A C G T G C T A A G T C A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C