Information for 16-TCCTGTCCAAAGC (Motif 12)

A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C G T A C T G C T A G C G T A T A G C C G T A A C T G A C T G C T G A
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.842
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.5 +/- 23.4bp
Average Position of motif in Background49.8 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCCTGTCCAAAGC
---ACATCAAAGG
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0082.1_Tcf3_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCCTGTCCAAAGC----
TATAGATCAAAGGAAAA
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCCTGTCCAAAGC----
NNNAGATCAAAGGANNN
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCTGTCCAAAGC--
-AAAGATCAAAGGAA
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCTGTCCAAAGC----
TATAGATCAAAGGAAAA
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCCTGTCCAAAGC
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGTCCAAAGC
GTGCCGTGTGCAAA--
 A C G T A C G T A C G T A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCCTGTCCAAAGC---
-AGAGTCCAAAGTCCA
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCTGTCCAAAGC----
NANAGATCAAAGGGNNN
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCCTGTCCAAAGC--
---ACATCAAAGGNA
 A G C T G T A C T G A C A C G T A T C G C G A T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A